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Immunology and Infection
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用于研究宿主-病原体相互作用的高通量转录组分析
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Immunology and Infection
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Immunology and Infection
High-Throughput Transcriptome Analysis for Investigating Host-Pathogen Interactions
Please note that all translations are automatically generated.
Click here for the English version.
用于研究宿主-病原体相互作用的高通量转录组分析
DOI:
10.3791/62324-v
•
14:58 min
•
March 05, 2022
•
André Nicolau Aquime Gonçalves
2
,
Vanessa Escolano Maso
,
Ícaro Maia Santos de Castro
3
,
Amanda Pereira Vasconcelos
,
Rodrigo Luiz Tomio Ogava
3
,
Helder I Nakaya
3,4
1
Laboratory of Pathology of Infectious Diseases, Department of Pathology, Medical School
,
University of São Paulo
,
2
Scientific Platform Pasteur USP
,
3
Department of Clinical and Toxicological Analyses, School of Pharmaceutical Sciences
,
University of São Paulo
,
4
Hospital Israelita Albert Einstein
Chapters
00:07
Introduction
01:15
Docker Desktop Installation
04:25
Quality Control
05:10
Mapping and Annotation Steps
05:51
Differentially Expressed Genes Process
06:10
Transfer Data to the Personal Computer
12:02
Representative Results
14:22
Conclusions
Summary
Automatic Translation
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Automatic Translation
这里介绍的方案描述了一个完整的管道,用于分析从原始读数到功能分析的RNA测序转录组数据,包括质量控制和预处理步骤到高级统计分析方法。
Tags
– High-throughput Transcriptome Analysis- Host-pathogen Interactions- Quality Control- Sequencing And Annotations- Statistical And Co-expression Analysis- Molecular Degree Of Perturbation Analysis- Functional Analysis- Docker Container- Chikungunya Virus- RNA Sequencing- Reference Genome- Gene Annotation
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